| Software for generating liability distributions for pedigrees conditional on their observed disease states and covariates |
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| Estimation of genotype relative risks from pedigree data by retrospective likelihoods |
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| Case‐only gene‐environment interaction studies: when does association imply mechanistic interaction? |
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| A powerful approach to sub‐phenotype analysis in population‐based genetic association studies |
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| Detecting interacting genetic loci with effects on quantitative traits where the nature and order of the interaction are unknown |
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HapMap CEU and YRI populations; population-specific genetic effect |
| What's the best statistic for a simple test of genetic association in a case‐control study? |
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| Gene, region and pathway level analyses in whole‐genome studies |
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| Aspects of observing and claiming allele flips in association studies |
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| Genetic Analysis Workshop 16: introduction to workshop summaries |
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| Genome‐wide association studies for discrete traits |
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| Genome‐wide association analyses of quantitative traits: the GAW16 experience |
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| Haplotype‐based analysis: a summary of GAW16 Group 4 analysis |
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| Improving the Signal‐to‐Noise ratio in genome‐wide association studies |
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| Analysis of multiple phenotypes |
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| The challenge of detecting epistasis (G×G Interactions): Genetic Analysis Workshop 16 |
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| Detecting gene‐environment interactions in genome‐wide association data |
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| Combining information from linkage and association methods |
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| Population stratification and patterns of linkage disequilibrium |
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"ethnic variation", "mixed ethnicity samples", "stratified or mixed ethnicity samples", "ethnicity" |
| Multistage analysis strategies for genome‐wide association studies: summary of group 3 contributions to Genetic Analysis Workshop 16 |
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| Phenotype definition and development—contributions from Group 7 |
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| Genome‐wide association studies: quality control and population‐based measures |
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| Machine learning in genome‐wide association studies |
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| Inclusion of a priori information in genome‐wide association analysis |
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| Use of longitudinal data in genetic studies in the genome‐wide association studies era: summary of Group 14 |
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| Summary of contributions to GAW Group 15: family‐based samples are useful in identifying common polymorphisms associated with complex traits |
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| Gene‐ or region‐based analysis of genome‐wide association studies |
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| Abstracts from the Eighteenth Annual Meeting of the International Genetic Epidemiology Society |
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| In remembrance of Richard Spielman |
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| Sibship analysis of associations between SNP haplotypes and a continuous trait with application to mammographic density |
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| Fitting ACE structural equation models to case‐control family data |
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| Comparing apples and oranges: equating the power of case‐control and quantitative trait association studies |
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| Variance‐components methods for linkage and association analysis of ordinal traits in general pedigrees |
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| Practical considerations for imputation of untyped markers in admixed populations |
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Northern and Western Europe (CEU); African Americans; African ancestry from Southwest USA (ASW); Yoruba in Ibadan, Nigeria (YRI) |
| Detecting rare variants for complex traits using family and unrelated data |
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| Meta‐analysis of genome‐wide association studies: no efficiency gain in using individual participant data |
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| STrengthening the REporting of Genetic Association Studies (STREGA)—an extension of the STROBE statement |
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| Mapping quantitative traits in unselected families: algorithms and examples |
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| An evaluation of statistical approaches to rare variant analysis in genetic association studies |
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| Comparisons of multi‐marker association methods to detect association between a candidate region and disease |
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| Genetic comparison of a Croatian isolate and CEPH European founders |
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"an outbred population of European origin: the Hapmap CEPH founders"; "outbred European populations" |
| A cross‐validation procedure for general pedigrees and matched odds ratio fitness metric implemented for the multifactor dimensionality reduction pedigree disequilibrium test |
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| Association tests using kernel‐based measures of multi‐locus genotype similarity between individuals |
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| Shades of gray: a comparison of linkage disequilibrium between Hutterites and Europeans |
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Europeans (HapMap CEU); outbred European populations; European populations |
| Extent and distribution of linkage disequilibrium in the Old Order Amish |
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| Detection of parent‐of‐origin effects using general pedigree data |
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| Correcting “winner's curse” in odds ratios from genomewide association findings for major complex human diseases |
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| Were genome‐wide linkage studies a waste of time? Exploiting candidate regions within genome‐wide association studies |
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| Assessment of SNP streak statistics using gene drop simulation with linkage disequilibrium |
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| Visualizing disease associations: graphic analysis of frequency distributions as a function of age using moving average plots (MAP) with application to Alzheimer's and Parkinson's disease |
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| Methods for detecting interactions between genetic polymorphisms and prenatal environment exposure with a mother‐child design |
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| Single‐marker and two‐marker association tests for unphased case‐control genotype data, with a power comparison |
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HapMap CEU population |
| Bayesian mixture modeling of gene‐environment and gene‐gene interactions |
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Central and Eastern Europe |
| Prostate cancer segregation analyses using 4390 families from UK and Australian population‐based studies |
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| A novel method for haplotype clustering and visualization |
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| Parametric model‐based statistics for possible genotyping errors and sample stratification in sibling‐pair SNP data |
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families of different ethnic origin (e.g., a population admixture); different ethnic origin of the p |
| Discovering genetic ancestry using spectral graph theory |
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| Case‐only genome‐wide interaction study of disease risk, prognosis and treatment |
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| Shrinkage estimation for robust and efficient screening of single‐SNP association from case‐control genome‐wide association studies |
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| Avoiding the high Bonferroni penalty in genome‐wide association studies |
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| On the use of phylogeny‐based tests to detect association between quantitative traits and haplotypes |
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European and African samples; African samples |
| Association test of multiallelic gene copy numbers in family trios |
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| On testing for genetic association in case‐control studies when population allele frequencies are known |
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| A modified forward multiple regression in high‐density genome‐wide association studies for complex traits |
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| A novel haplotype‐sharing approach for genome‐wide case‐control association studies implicates the calpastatin gene in Parkinson's disease |
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| A note on permutation tests for genetic association analysis of quantitative traits when variances are heterogeneous |
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| Gene‐environment interaction tests for dichotomous traits in trios and sibships |
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| Genome‐wide association scans for secondary traits using case‐control samples |
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| A propensity score approach to correction for bias due to population stratification using genetic and non‐genetic factors |
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racial/ethnic subpopulations |
| Pathway analysis by adaptive combination of <i>P</i>‐values |
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| Case‐control association testing in the presence of unknown relationships |
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| A comparison of analytical methods for genetic association studies |
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| Identification of gene‐gene interactions in the presence of missing data using the multifactor dimensionality reduction method |
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| Testing for genetic association in the presence of population stratification in genome‐wide association studies |
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| Using genome‐wide pathway analysis to unravel the etiology of complex diseases |
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| Adapting the logical basis of tests for Hardy‐Weinberg Equilibrium to the real needs of association studies in human and medical genetics |
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| Likelihood ratio tests for maternal and fetal genetic effects on obstetric complications |
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| A new measure of the effective number of tests, a practical tool for comparing families of non‐independent significance tests |
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| The sumLINK statistic for genetic linkage analysis in the presence of heterogeneity |
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| On the adjustment for covariates in genetic association analysis: a novel, simple principle to infer direct causal effects |
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| Phase uncertainty in case‐control association studies |
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| Testing Hardy‐Weinberg equilibrium using mother‐child case‐control samples |
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| SNP selection and multidimensional scaling to quantify population structure |
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| Bayesian intervals for linkage locations |
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| Statistical validation of endophenotypes using a surrogate endpoint analytic analogue |
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| VALID: visualization of association study results and linkage disequilibrium |
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| Replication of genetic associations as pseudoreplication due to shared genealogy |
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| Asymptotic tests of association with multiple SNPs in linkage disequilibrium |
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| Genotype‐based matching to correct for population stratification in large‐scale case‐control genetic association studies |
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| Adaptively weighted association statistics |
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| Unbiased estimation of odds ratios: combining genomewide association scans with replication studies |
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| Genetic background comparison using distance‐based regression, with applications in population stratification evaluation and adjustment |
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| Quantifying and correcting for the winner's curse in genetic association studies |
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| A joint association test for multiple SNPs in genetic case‐control studies |
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